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  5. Gb_02486

Gb_02486


Description : transcription factor (BBX-CO)


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02486

Target Alias Description ECC score Gene Family Method Actions
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Aev_g24424 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01755 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30657 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16706.t2 Aspi01Gene16706 CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18419.t1 Aspi01Gene18419 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g04980 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
LOC_Os06g15330.1 LOC_Os06g15330 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Ore_g09212 No alias CMF transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g43291 No alias CMF transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g12347 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo141010 COL3, ATCOL3 RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc07g008540.3.1 CIA2, Solyc07g008540 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 381 423
No external refs found!