Gb_02576 (SPL2)

Aliases : SPL2

Description : transcription factor (SBP)

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_02576

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00198330	AtSPL9, SPL9,...	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
Aev_g08078	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08472	No alias	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10734	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25097.t1	SPL2, Aspi01Gene25097	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cre10.g433350	SPL4	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
GSVIVT01012247001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
LOC_Os08g41940.1	SPL13, SPL13A,...	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
Ore_g43928	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g062980.4.1	SPL3, Solyc07g062980	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	246	319

External Links

No external refs found!