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  5. Gb_02857

Gb_02857


Description : F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana (sp|q9fkj0|fk132_arath : 121.0)


Gene families : OG0001254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02857
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Als_g14963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67035.t1 Aspi01Gene67035 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G035600.1 Ceric.24G035600 not classified & original description: pacid=50629765... 0.05 OrthoFinder output from all 47 species
Dac_g27300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05764 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_06368 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_15131 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g13425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44644 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 56
IPR011498 Kelch_2 221 261
No external refs found!