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  5. Gb_03474

Gb_03474 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 721.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03474
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT1G09410 No alias pentatricopeptide (PPR) repeat-containing protein 0.06 OrthoFinder output from all 47 species
AT2G37320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.04 OrthoFinder output from all 47 species
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G37170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
GSVIVT01002530001 No alias Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
GSVIVT01009866001 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
GSVIVT01009976001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01010125001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01011735001 No alias Pentatricopeptide repeat-containing protein At2g01510,... 0.05 OrthoFinder output from all 47 species
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
GSVIVT01015087001 CRR2 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
GSVIVT01015468001 No alias Pentatricopeptide repeat-containing protein At1g31430... 0.05 OrthoFinder output from all 47 species
GSVIVT01017378001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
GSVIVT01018098001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
GSVIVT01018922001 No alias Putative pentatricopeptide repeat-containing protein... 0.1 OrthoFinder output from all 47 species
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01021774001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.04 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
GSVIVT01027839001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01032394001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.05 OrthoFinder output from all 47 species
GSVIVT01035618001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 OrthoFinder output from all 47 species
GSVIVT01036010001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01037332001 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Gb_21824 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_23320 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_27291 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_32017 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Gb_34299 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_38158 CRR2 OTP70 plastidial RNA splicing factor 0.06 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
MA_10426261g0020 CRR22 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_10431508g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_11517g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_116829g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_136498g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_16917g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_178429g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_184104g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_20899g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_28390g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_28607g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_376862g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_656915g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_68718g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_87646g0010 No alias RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species
MA_946216g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_953240g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
MA_96662g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 541 588
IPR002885 Pentatricopeptide_repeat 340 386
IPR002885 Pentatricopeptide_repeat 439 483
IPR002885 Pentatricopeptide_repeat 238 284
IPR002885 Pentatricopeptide_repeat 137 183
IPR032867 DYW_dom 714 838
IPR002885 Pentatricopeptide_repeat 313 336
IPR002885 Pentatricopeptide_repeat 616 639
No external refs found!