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  5. Gb_03493

Gb_03493


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03493

Target Alias Description ECC score Gene Family Method Actions
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.02 OrthoFinder output from all 47 species
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 OrthoFinder output from all 47 species
AT1G63880 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT3G25505 No alias No description available 0.02 OrthoFinder output from all 47 species
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G09420 No alias Disease resistance protein (TIR-NBS class) 0.05 OrthoFinder output from all 47 species
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.04 OrthoFinder output from all 47 species
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.04 OrthoFinder output from all 47 species
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Dac_g43390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_23307 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_23545 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_27878 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_10109059g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10427131g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432202g0030 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10432451g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433003g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433723g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433845g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10435728g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10435852g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10437230g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_162006g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_182712g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_365179g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_75103g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_86318g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9394663g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc05g024370.1.1 Solyc05g024370 TMV resistance protein N OS=Nicotiana glutinosa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000157 TIR_dom 5 135
No external refs found!