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  5. Gb_03515

Gb_03515 (CP12, CP12-2)


Aliases : CP12, CP12-2

Description : Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana (sp|q9lzp9|cp122_arath : 105.0)


Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03515
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00175560 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.12 OrthoFinder output from all 47 species
Adi_g048511 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Adi_g106137 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Aop_g10777 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene11309.t1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene45030.t1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Cre08.g380250 CP12-1, CP12 Calvin cycle protein CP12, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g12215 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Dac_g32821 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Dcu_g40442 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Dde_g03082 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Ehy_g17531 CP12-3 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Len_g42311 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
MA_524595g0010 CP12, CP12-2 Calvin cycle protein CP12-2, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp2g10550.1 CP12-3 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g10264 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Nbi_g01618 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Ore_g22166 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Pir_g14932 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Pnu_g05976 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Ppi_g53465 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Spa_g00117 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.11 OrthoFinder output from all 47 species
Spa_g04578 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Tin_g09684 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.08 OrthoFinder output from all 47 species
Zm00001e036178_P001 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR003823 CP12_dom 101 169
No external refs found!