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  5. Gb_04489

Gb_04489


Description : BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana (sp|q9c9v6|y1790_arath : 635.0)


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04489
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 RPT3, NPH3,... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g073194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18908 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Als_g38040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19940 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aop_g33236 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene17057.t1 RPT3, NPH3,... substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23539.t1 Aspi01Gene23539 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene41127.t1 Aspi01Gene41127 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.34G006100.1 Ceric.34G006100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Dac_g14453 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g16053 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dcu_g08307 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01035968001 MAB4, NPY1, ENP BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g10800.2 NPY2, LOC_Os03g10800 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g40100.1 LOC_Os04g40100 BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
Len_g01351 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Lfl_g03375 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g04882 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g08905 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g65173 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g25277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38846 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc03g044090.4.1 NPY2, Solyc03g044090 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g47140 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Zm00001e008748_P001 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Zm00001e033674_P003 Zm00001e033674 BTB/POZ domain-containing protein At5g47800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 259 543
No external refs found!