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  5. Gb_05398

Gb_05398 (sks5)


Aliases : sks5

Description : L-ascorbate oxidase homolog OS=Brassica napus (sp|q00624|asol_brana : 255.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor(50.1.10 : 90.1)


Gene families : OG0000411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05398

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00093220 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
AMTR_s00159p00040990 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
AMTR_s00163p00059030 sks3,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
AT1G55570 sks12 SKU5 similar 12 0.02 OrthoFinder output from all 47 species
AT1G75790 sks18 SKU5 similar 18 0.05 OrthoFinder output from all 47 species
AT2G23630 sks16 SKU5 similar 16 0.04 OrthoFinder output from all 47 species
AT5G66920 sks17 SKU5 similar 17 0.03 OrthoFinder output from all 47 species
Dcu_g44710 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.06 OrthoFinder output from all 47 species
GSVIVT01001270001 SKU5 Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01016181001 SKU5 Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os07g02810.1 sks17, LOC_Os07g02810 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os08g05820.1 SKU5, LOC_Os08g05820 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g36390.1 SKU5, LOC_Os10g36390 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g06759 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Pnu_g21610 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g13020 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ppi_g33219 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Sam_g09055 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Sam_g35195 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Sam_g49227 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Solyc02g065170.3.1 sks17, Solyc02g065170 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Solyc04g081520.3.1 sks18, Solyc04g081520 Monocopper oxidase-like protein SKS1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g40812 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Zm00001e035081_P001 sks5, Zm00001e035081 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0031225 obsolete anchored component of membrane IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006918 COBRA_pln 5 51
IPR001117 Cu-oxidase_2nd 187 271
IPR011707 Cu-oxidase_N 69 175
No external refs found!