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  5. Gb_05764

Gb_05764


Description : F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana (sp|q9fkj0|fk132_arath : 97.1)


Gene families : OG0001254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05764
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Als_g61629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18917.t1 Aspi01Gene18917 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67037.t1 Aspi01Gene67037 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G035600.1 Ceric.24G035600 not classified & original description: pacid=50629765... 0.08 OrthoFinder output from all 47 species
Dac_g27300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02857 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g13425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34761 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g16484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44644 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017112 No alias not classified & original description: CDS=1-1176 0.03 OrthoFinder output from all 47 species
Spa_g12889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 20 59
IPR011498 Kelch_2 224 264
No external refs found!