Aliases : PIF3, POC1, PAP3
Description : transcription factor (bHLH). PIF red/far-red light perception transcriptional regulator
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00267570 | UNE12,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00146370 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00137860 | BEE3,... | External stimuli response.light.UV-A/blue... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00164p00062120 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.01 | OrthoFinder output from all 47 species | |
| AT2G42300 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT4G28790 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10321 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g10817 | SPT | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g21170 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g26066 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g00973 | SPT | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g08145 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29152 | HEC2 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g32315 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g48384 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g50421 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07421 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18607 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29816 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g35268 | HEC1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g60014 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene03952.t1 | Aspi01Gene03952 | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene04843.t1 | LRL3, Aspi01Gene04843 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene05129.t1 | RSL2, Aspi01Gene05129 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene12792.t1 | HEC2, Aspi01Gene12792 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14949.t1 | LRL3, Aspi01Gene14949 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene25247.t1 | LRL3, Aspi01Gene25247 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28459.t1 | SPT, Aspi01Gene28459 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene35709.t2 | Aspi01Gene35709 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene44356.t1 | RSL2, Aspi01Gene44356 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46202.t1 | Aspi01Gene46202 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene54622.t1 | LRL3, Aspi01Gene54622 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene54623.t1 | LRL3, Aspi01Gene54623 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0056.g034059 | RHD6 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0075.g037605 | LRL3 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042718 | RSL2 | bHLH-type transcription factor & original description:... | 0.11 | OrthoFinder output from all 47 species | |
| Azfi_s0197.g057308 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s2566.g112182 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34527 | HEC2 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g68995 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G038900.1 | LRL3, Ceric.04G038900 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.08G020500.1 | RSL2, Ceric.08G020500 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.08G040100.1 | RSL2, Ceric.08G040100 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G032200.1 | Ceric.11G032200 | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G026700.1 | Ceric.16G026700 | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.17G001900.1 | CIB1, Ceric.17G001900 | regulatory protein (CIB) of blue light perception &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.1Z051300.1 | LRL3, Ceric.1Z051300 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G074300.1 | Ceric.22G074300 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G068300.1 | Ceric.32G068300 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10732 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g16940 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g21654 | HEC1 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g23770 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31685 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g37679 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06216 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07694 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12888 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25483 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g09150 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18466 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g29606 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01008093001 | No alias | External stimuli response.light.UV-A/blue... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01009292001 | No alias | External stimuli response.light.UV-A/blue... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020121001 | No alias | External stimuli response.light.UV-A/blue... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01020814001 | SRL2, PIF4, AtPIF4 | External stimuli response.light.red/far red light.PIF... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028238001 | PIF3, POC1, PAP3 | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032055001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01037846001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_27302 | No alias | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_30839 | RHD6 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g47660.1 | CIB1, LOC_Os02g47660 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g55250.1 | LRL3, LOC_Os02g55250 | transcription factor (bHLH) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os04g41229.1 | LOC_Os04g41229 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g46370.1 | LOC_Os05g46370 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g28210.1 | HEC1, LOC_Os09g28210 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g25560.1 | LOC_Os11g25560 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g37679 | RHD6 | LHW/LHL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g47855 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04933 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08507 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10731 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12392 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g20995 | BPEp, ZCW32, BPE, BPEub | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g21546 | UNE12 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37660 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| MA_120179g0010 | UNE12 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Mp3g17350.1 | SPT | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g21470.1 | RSL2 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11326 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19998 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42592 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43162 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06488 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09507 | HEC1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g38111 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g50236 | PIL5, PIF1 | regulatory protein *(PIF) of red/far-red light... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g56438 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g58445 | No alias | regulatory protein (CIB) of blue light perception &... | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g02210 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29684 | HEC2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0050.g013831 | SPT | bHLH-type transcription factor & original description: CDS=1-1485 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0094.g019148 | HEC3 | bHLH-type transcription factor & original description: CDS=1-1293 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0237.g026567 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11299 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo39143 | ALC | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Smo425336 | LRL1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109700.3.1 | CIB1, Solyc01g109700 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g062690.3.1 | BEE2, Solyc02g062690 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g034000.3.1 | BEE2, Solyc03g034000 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc03g119390.4.1 | BEE3, Solyc03g119390 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g005130.3.1 | Solyc04g005130 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g077480.3.1 | Solyc04g077480 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g006650.3.1 | Solyc05g006650 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g065820.4.1 | UNE12, Solyc09g065820 | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g24430 | HEC1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g33531 | RHD6 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g37930 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41645 | RHD6 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41791 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g31873 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e005046_P003 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011866_P002 | UNE12, Zm00001e011866 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018946_P001 | Zm00001e018946 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019392_P001 | Zm00001e019392 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e025656_P001 | RHD6, Zm00001e025656 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028489_P003 | Zm00001e028489 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032950_P002 | UNE12, Zm00001e032950 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 518 | 564 |
| No external refs found! |
