Aliases : EMB2261
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 697.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00252800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00242080 | CRR28,... | Pentatricopeptide repeat-containing protein At1g59720,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s03531p00004900 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G20540 | MEF21 | mitochondrial editing factor 21 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G23330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005730 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42051 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g03970 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07268 | CRR2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19301 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27916 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001369 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: CDS=172-2610 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025464 | No alias | not classified & original description: CDS=1-2154 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048744 | No alias | not classified & original description: CDS=1-2109 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34432 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06891 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g22538 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36116 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38574 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50128 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13211 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000968001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015233001 | EMB2261 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017996001 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021023001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036511001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037258001 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36434 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38248 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38417 | CRR2 | OTP70 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_41234 | OTP86 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g27650.1 | LOC_Os01g27650 | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g33700.1 | LOC_Os08g33700 | Pentatricopeptide repeat-containing protein At3g47530... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g01850.1 | LOC_Os12g01850 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04198 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19879 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_138689g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| MA_211508g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_25729g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_470025g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_53781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| MA_68718g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_83898g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03928 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28348 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17858 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0244.g026676 | No alias | not classified & original description: CDS=1-2475 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25339 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28758 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo110549 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g076700.1.1 | Solyc02g076700 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g051780.3.1 | Solyc03g051780 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g116840.3.1 | Solyc03g116840 | RNA editing factor (OTP81) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18079 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g16956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011748_P001 | LPA66, Zm00001e011748 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019971_P001 | Zm00001e019971 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025557_P001 | Zm00001e025557 | Pentatricopeptide repeat-containing protein At5g56310... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 467 | 493 |
| IPR002885 | Pentatricopeptide_repeat | 270 | 298 |
| IPR002885 | Pentatricopeptide_repeat | 495 | 524 |
| IPR002885 | Pentatricopeptide_repeat | 239 | 267 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 330 |
| IPR002885 | Pentatricopeptide_repeat | 730 | 754 |
| IPR002885 | Pentatricopeptide_repeat | 332 | 361 |
| IPR002885 | Pentatricopeptide_repeat | 202 | 234 |
| IPR032867 | DYW_dom | 829 | 953 |
| IPR002885 | Pentatricopeptide_repeat | 656 | 704 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 602 |
| IPR002885 | Pentatricopeptide_repeat | 391 | 439 |
| IPR002885 | Pentatricopeptide_repeat | 135 | 183 |
| No external refs found! |
