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  5. Gb_07922

Gb_07922 (VPS11, ATVPS11)


Aliases : VPS11, ATVPS11

Description : Vacuolar protein-sorting-associated protein 11 homolog OS=Arabidopsis thaliana (sp|q9sj40|vps11_arath : 89.4)


Gene families : OG0006628 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006628_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07922

Target Alias Description ECC score Gene Family Method Actions
Ceric.13G089700.1 VPS11, ATVPS11,... component *(VPS11) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Dcu_g06475 VPS11, ATVPS11 component *(VPS11) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
GSVIVT01030049001 VPS11, ATVPS11 Vesicle trafficking.target membrane... 0.03 OrthoFinder output from all 47 species
MA_20596g0020 VPS11, ATVPS11 component VPS11 of HOPS/CORVET membrane tethering complexes 0.05 OrthoFinder output from all 47 species
Solyc06g065170.4.1 VPS11, ATVPS11,... component VPS11 of HOPS/CORVET membrane tethering complexes 0.05 OrthoFinder output from all 47 species
Zm00001e040735_P002 VPS11, ATVPS11,... component VPS11 of HOPS/CORVET membrane tethering complexes 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!