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  5. Gb_08087

Gb_08087 (NRAMP6, ATNRAMP6)


Aliases : NRAMP6, ATNRAMP6

Description : metal cation transporter (NRAMP)


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08087

Target Alias Description ECC score Gene Family Method Actions
Ala_g18301 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26408 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30659 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40726.t1 PMIT1, NRAMP1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17565 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37580 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07386 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000173001 ATNRAMP3, NRAMP3 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
LOC_Os02g03900.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
MA_10430859g0010 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
MA_884894g0010 NRAMP6, ATNRAMP6 Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp4g07480.1 ATNRAMP4, NRAMP4 metal cation transporter (NRAMP) 0.04 OrthoFinder output from all 47 species
Mp4g20480.1 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.06 OrthoFinder output from all 47 species
Msp_g26715 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04230 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g33813 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16965 ATNRAMP3, NRAMP3 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013557_P001 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 81 443
No external refs found!