Gb_08496

Description : pectin methylesterase

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08496

Target	Alias	Description	ECC score	Gene Family Method
Adi_g046688	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g127146	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g38864	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0103.g044651	No alias	pectin methylesterase & original description: CDS=1-1083	0.04	OrthoFinder output from all 47 species
Ceric.11G006600.1	Ceric.11G006600	pectin methylesterase & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g05020	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11351	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g27753	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10267810g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
MA_62865g0010	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Mp2g01420.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp2g19430.1	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Mp3g01170.1	No alias	pectin methylesterase	0.01	OrthoFinder output from all 47 species
Ore_g32792	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g31349	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c16_19430V3.1	Pp3c16_19430	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
Pp3c5_12820V3.1	Pp3c5_12820	Pectin lyase-like superfamily protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015086	No alias	pectin methylesterase & original description: CDS=460-1611	0.03	OrthoFinder output from all 47 species
Spa_g54581	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54582	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007306_P001	Zm00001e007306	pectin methylesterase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	82	373

External Links

No external refs found!

Gb_08496

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation