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  5. Gb_08517

Gb_08517


Description : clade F phosphatase


Gene families : OG0000578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08517
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00232020 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
AMTR_s00183p00042550 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
AT1G22280 PAPP2C phytochrome-associated protein phosphatase type 2C 0.05 OrthoFinder output from all 47 species
AT4G28400 No alias Protein phosphatase 2C family protein 0.06 OrthoFinder output from all 47 species
Aev_g37458 No alias clade F phosphatase & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g37504 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02436 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01517 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0077.g038059 No alias clade F phosphatase & original description: CDS=163-1041 0.03 OrthoFinder output from all 47 species
Cba_g23426 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G118400.1 Ceric.01G118400 clade F phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G076700.1 Ceric.07G076700 clade F phosphatase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.24G005500.1 Ceric.24G005500 clade F phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11550 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12953 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32565 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02736 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20335 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06504 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009035001 PAPP2C Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
GSVIVT01020581001 No alias Protein modification.dephosphorylation.serine/threonine... 0.08 OrthoFinder output from all 47 species
GSVIVT01034268001 No alias Protein modification.dephosphorylation.serine/threonine... 0.08 OrthoFinder output from all 47 species
LOC_Os07g32380.1 LOC_Os07g32380 clade F phosphatase 0.03 OrthoFinder output from all 47 species
Len_g09950 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02753 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07067 No alias clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g50876 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53344 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011718 No alias clade F phosphatase & original description: CDS=155-994 0.03 OrthoFinder output from all 47 species
Smo230443 No alias Protein modification.dephosphorylation.serine/threonine... 0.05 OrthoFinder output from all 47 species
Solyc01g105280.3.1 Solyc01g105280 clade F phosphatase 0.04 OrthoFinder output from all 47 species
Solyc10g047290.2.1 Solyc10g047290 clade F phosphatase 0.03 OrthoFinder output from all 47 species
Spa_g07895 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07896 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17248 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19235 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035067_P001 Zm00001e035067 clade F phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e041615_P001 Zm00001e041615 clade F phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e041710_P002 Zm00001e041710 clade F phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 60 290
No external refs found!