Gb_08935

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08935

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00126980	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT4G16860	RPP4	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G22690	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT5G46260	No alias	disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Adi_g053618	No alias	effector receptor *(NLR) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g066110	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01020123001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
MA_10427107g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_10437230g0040	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_178158g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_178820g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_32168g0020	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
MA_746330g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_7600g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Pir_g39828	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g41608	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g46276	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g102880.3.1	Solyc01g102880	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
Solyc05g006630.4.1	Solyc05g006630	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc05g007850.2.1	Solyc05g007850	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Solyc07g055380.1.1	Solyc07g055380	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	858	880
IPR001611	Leu-rich_rpt	906	928
IPR002182	NB-ARC	243	465
IPR000157	TIR_dom	60	223

External Links

No external refs found!

Gb_08935

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation