Gb_09197

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_09197

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00233110	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
AMTR_s00060p00213070	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00085p00123400	evm_27.TU.AmTr_v1...	TMV resistance protein N OS=Nicotiana glutinosa	0.03	OrthoFinder output from all 47 species
AMTR_s00110p00115240	No alias	External stimuli response.biotic stress.pathogen...	0.02	OrthoFinder output from all 47 species
AT1G72890	No alias	Disease resistance protein (TIR-NBS class)	0.02	OrthoFinder output from all 47 species
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
Als_g32850	LAZ5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g50407	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08803	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01020980001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
Gb_11158	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10426286g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10433845g0020	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10435505g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_119183g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_908452g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Nbi_g23825	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c4_30410V3.1	Pp3c4_30410	Disease resistance protein (TIR-NBS-LRR class) family	0.01	OrthoFinder output from all 47 species
Solyc11g011350.3.1	Solyc11g011350	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Solyc11g013750.3.1	Solyc11g013750	Disease resistance protein RPS4 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	186	413
IPR000157	TIR_dom	5	169

External Links

No external refs found!

Gb_09197

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation