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  5. Gb_10530

Gb_10530


Description : Protein ALP1-like OS=Arabidopsis thaliana (sp|q9m2u3|alpl_arath : 217.0)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10530
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Ala_g21380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03722 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_05676 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.02 OrthoFinder output from all 47 species
Gb_13002 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
Gb_14676 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.03 OrthoFinder output from all 47 species
Gb_19878 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_19980 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_24969 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27420 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_28057 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
Gb_28925 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_32519 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38709 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.06 OrthoFinder output from all 47 species
Gb_41447 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.04 OrthoFinder output from all 47 species
Lfl_g20361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_301324g0010 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g084150.4.1 Solyc06g084150 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 89 252
No external refs found!