1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_10628

Gb_10628


Description : anion transporter (NRT1/PTR)


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10628

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00083970 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00148850 ATPTR2, PTR2,... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00215100 PTR1, ATPTR1,... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AMTR_s00104p00113760 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00118p00123380 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00118p00128710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AMTR_s00118p00129200 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AT1G32450 NRT1.5 nitrate transporter 1.5 0.03 OrthoFinder output from all 47 species
AT3G47960 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g24082 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38724 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14671 No alias anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08535 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G075100.1 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G050400.1 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G027500.1 NRT1.7, Ceric.32G027500 anion transporter *(NRT1/PTR) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g13732 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25295 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001292001 NRT1.1, B-1,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
GSVIVT01015522001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01015523001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01026058001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01028391001 ATPTR3, PTR3 Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Gb_10650 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Gb_11866 No alias anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Gb_24311 No alias anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Gb_25421 NRT1.5 anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Gb_37684 NRT1.5 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Gb_41118 PTR5, ATPTR5 anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
LOC_Os01g65130.1 LOC_Os01g65130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g67640.1 PTR1, ATPTR1,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50950.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27010.1 LOC_Os05g27010 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27050.1 LOC_Os05g27050 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os05g35594.1 LOC_Os05g35594 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os11g12740.1 LOC_Os11g12740 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Len_g40141 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08377 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437108g0010 No alias anion transporter (NRT1/PTR) 0.06 OrthoFinder output from all 47 species
MA_107155g0020 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
MA_114170g0010 No alias anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
MA_138189g0010 ATPTR3, PTR3 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
MA_19263g0020 NRT1:2, NTL1, ATNRT1:2 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_364465g0010 No alias anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
MA_698620g0010 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_93406g0010 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_9770591g0010 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Mp2g04630.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Mp6g01230.1 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Nbi_g06701 NRT1.1, B-1,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07654 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20611 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28309 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41961 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14557 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20960 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_18680V3.1 PTR1, ATPTR1, Pp3c6_18680 peptide transporter 2 0.01 OrthoFinder output from all 47 species
Smo119745 PTR5, ATPTR5 Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Smo88337 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Solyc04g005790.3.1 NRT1:2, NTL1,... abscisic acid transporter (AIT). anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Solyc04g079520.3.1 Solyc04g079520 anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Solyc07g032490.3.1 Solyc07g032490 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Solyc10g084950.3.1 Solyc10g084950 anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Solyc11g042820.2.1 Solyc11g042820 anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Spa_g11194 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16573 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34241 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004615_P001 ATPTR3, PTR3,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e011037_P001 Zm00001e011037 anion transporter (NRT1/PTR) 0.07 OrthoFinder output from all 47 species
Zm00001e014939_P001 Zm00001e014939 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e026398_P001 Zm00001e026398 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 101 246
IPR000109 POT_fam 249 461
No external refs found!