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  5. Gb_10709

Gb_10709 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 585.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10709
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aev_g42176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g43823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_02808 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.05 OrthoFinder output from all 47 species
Gb_03579 No alias RNA editing factor (MEF12) 0.06 OrthoFinder output from all 47 species
Gb_10113 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.05 OrthoFinder output from all 47 species
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_19828 No alias RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_64083g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_65500g0010 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo105776 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.07 OrthoFinder output from all 47 species
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Smo82024 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Tin_g27180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 214
IPR002885 Pentatricopeptide_repeat 595 618
IPR002885 Pentatricopeptide_repeat 216 264
IPR002885 Pentatricopeptide_repeat 119 163
IPR002885 Pentatricopeptide_repeat 318 364
IPR002885 Pentatricopeptide_repeat 419 464
IPR002885 Pentatricopeptide_repeat 520 567
IPR032867 DYW_dom 693 751
No external refs found!