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  5. Gb_10787

Gb_10787 (AVA-2PE, AVA-P2, ATVHA-C2)


Aliases : AVA-2PE, AVA-P2, ATVHA-C2

Description : subunit c of V-type ATPase membrane V0 subcomplex


Gene families : OG0000979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10787
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT4G34720 ATVHA-C1, AVA-P1, VHA-C1 ATPase, F0/V0 complex, subunit C protein 0.05 OrthoFinder output from all 47 species
AT4G38920 VHA-C3, AVA-P3, ATVHA-C3 vacuolar-type H(+)-ATPase C3 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000989.42 No alias Solute transport.primary active transport.V-type ATPase... 0.01 OrthoFinder output from all 47 species
Cre06.g257450 No alias Solute transport.primary active transport.V-type ATPase... 0.04 OrthoFinder output from all 47 species
Dcu_g05181 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009832001 No alias Solute transport.primary active transport.V-type ATPase... 0.03 OrthoFinder output from all 47 species
Mp5g20810.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.02 OrthoFinder output from all 47 species
Nbi_g18732 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Pnu_g24852 AVA-2PE, AVA-P2, ATVHA-C2 subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Solyc04g081090.3.1 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species
Solyc10g054560.2.1 Solyc10g054560 subunit c of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e009048_P001 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from all 47 species
Zm00001e018436_P001 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e024502_P002 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEA Interproscan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002379 ATPase_proteolipid_c-like_dom 17 76
IPR002379 ATPase_proteolipid_c-like_dom 97 155
No external refs found!