Gb_10865

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 128.0)

Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_10865

Target	Alias	Description	ECC score	Gene Family Method
Adi_g014659	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g052511	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene33666.t1	ORF145A, Aspi01Gene33666	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67798.t1	Aspi01Gene67798	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene70418.t1	Aspi01Gene70418	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene72367.t1	Aspi01Gene72367	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01024357001	ATMYB64, ATMYB92, MYB92	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
Gb_08402	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_26102	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Nbi_g18866	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17967	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	45	156

External Links

No external refs found!