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  5. Gb_11389

Gb_11389 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 693.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11389
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g004975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096184 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011501001 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.04 OrthoFinder output from all 47 species
GSVIVT01018098001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
GSVIVT01025639001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_02379 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_03570 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_03997 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_10713 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Gb_13222 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_16327 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_24928 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_27437 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_33062 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_38248 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101084g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_10214098g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_10277392g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_10428121g0010 REME1 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
MA_10429371g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_10429540g0010 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.04 OrthoFinder output from all 47 species
MA_10429540g0020 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.05 OrthoFinder output from all 47 species
MA_10429837g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_10430355g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_10431508g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_104937g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
MA_107356g0010 CRR2 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_108139g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_112594g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_116829g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_122546g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_137736g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_14938g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_16226g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_175688g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_178429g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_20585g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_20899g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.08 OrthoFinder output from all 47 species
MA_27147g0010 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.03 OrthoFinder output from all 47 species
MA_2991g0010 No alias RNA editing factor (MEF12) 0.04 OrthoFinder output from all 47 species
MA_30632g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_33151g0010 OTP86 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
MA_3317g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_3449g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_35442g0010 No alias RNA editing factor (SLO2) 0.05 OrthoFinder output from all 47 species
MA_36643g0010 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
MA_38266g0010 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_412g0010 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_445076g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 OrthoFinder output from all 47 species
MA_49292g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
MA_56660g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_59148g0010 CRR22 RNA editing factor (MEF11) 0.04 OrthoFinder output from all 47 species
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_632994g0010 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
MA_65500g0010 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.07 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_68718g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_68933g0010 CRR22 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_778985g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_858608g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
MA_905781g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
MA_921g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
MA_958908g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_96662g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
MA_97789g0010 CRR22 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.03 OrthoFinder output from all 47 species
Zm00001e035654_P001 EMB2758, Zm00001e035654 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 722 846
IPR002885 Pentatricopeptide_repeat 348 394
IPR002885 Pentatricopeptide_repeat 548 596
IPR002885 Pentatricopeptide_repeat 447 494
IPR002885 Pentatricopeptide_repeat 246 293
IPR002885 Pentatricopeptide_repeat 145 192
IPR002885 Pentatricopeptide_repeat 624 647
No external refs found!