Aliases : REME1
Description : Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana (sp|q9liq7|pp252_arath : 520.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00268120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00220510 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00062420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g20730... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00204910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g19191,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00230160 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00023570 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00130050 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00223290 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00069p00058270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00166950 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00092p00064890 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G50270 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G15930 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G16470 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004364 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g07974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19009 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05671 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19114 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30821 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55125 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27561 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27592 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g36669 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20910 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g67878 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene46643.t1 | Aspi01Gene46643 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g32521 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g37586 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.04G051300.1 | CRR22, Ceric.04G051300 | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G053200.1 | Ceric.07G053200 | not classified & original description: pacid=50626825... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.10G047500.1 | Ceric.10G047500 | not classified & original description: pacid=50612222... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000383.101 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.200 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g16457 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30491 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46917 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g12128 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13146 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01009574001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01012938001 | SLO1 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01016874001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01017075001 | OTP82 | Pentatricopeptide repeat-containing protein At3g12770... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01017989001 | LOI1, MEF11 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01030054001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030443001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033863001 | No alias | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g20420.1 | LOC_Os07g20420 | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08837 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17561 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18587 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23506 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g25855 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07246 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g32907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
| MA_111990g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| MA_112849g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_121102g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_122899g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_131437g0010 | No alias | RNA editing factor (MEF3) | 0.03 | OrthoFinder output from all 47 species | |
| MA_135424g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.05 | OrthoFinder output from all 47 species | |
| MA_139163g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| MA_210823g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_370961g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.07 | OrthoFinder output from all 47 species | |
| MA_40997g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
| MA_41676g0020 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_733561g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| MA_7379g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| MA_73895g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
| MA_74986g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| MA_87646g0010 | No alias | RNA editing factor (MEF13) | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03200 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g25357 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g57161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11096 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53562 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16371 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo136134 | EMB2261 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g006920.4.1 | Solyc01g006920 | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g090510.2.1 | Solyc01g090510 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g091610.1.1 | Solyc01g091610 | Pentatricopeptide repeat-containing protein At2g27610... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g068630.1.1 | Solyc02g068630 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g070710.3.1 | Solyc02g070710 | Pentatricopeptide repeat-containing protein At3g20730... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc03g063690.1.1 | MEF1, Solyc03g063690 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g097850.1.1 | Solyc03g097850 | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009000.1.1 | Solyc04g009000 | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g063300.3.1 | Solyc04g063300 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g074160.3.1 | Solyc04g074160 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g046280.3.1 | Solyc05g046280 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g062610.2.1 | Solyc06g062610 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g084580.1.1 | Solyc06g084580 | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g053520.2.1 | SLO1, Solyc07g053520 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g008590.1.1 | Solyc10g008590 | Putative pentatricopeptide repeat-containing protein... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14333 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20734 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g53358 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06622 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e011519_P001 | Zm00001e011519 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011923_P001 | Zm00001e011923 | Pentatricopeptide repeat-containing protein At4g21300... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e012607_P002 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013211_P001 | OTP82, Zm00001e013211 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014800_P001 | OTP82, Zm00001e014800 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019971_P001 | Zm00001e019971 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023333_P001 | Zm00001e023333 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e023504_P001 | CRR22, Zm00001e023504 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024311_P001 | Zm00001e024311 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e031693_P001 | Zm00001e031693 | Pentatricopeptide repeat-containing protein At4g14050,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033171_P001 | Zm00001e033171 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035419_P001 | Zm00001e035419 | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e036301_P001 | Zm00001e036301 | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 118 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 363 | 386 |
| IPR002885 | Pentatricopeptide_repeat | 90 | 115 |
| IPR002885 | Pentatricopeptide_repeat | 291 | 315 |
| IPR032867 | DYW_dom | 391 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 14 | 63 |
| IPR002885 | Pentatricopeptide_repeat | 216 | 264 |
| No external refs found! |
