Gb_12687


Description : no hits & (original description: none)


Gene families : OG0004243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12687

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00215160 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G56220 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Aev_g32987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01029435001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g55530.1 LOC_Os01g55530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g38970.1 LOC_Os08g38970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g30380.1 LOC_Os09g30380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10261150g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_178762g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09681 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008493 No alias not classified & original description: CDS=1-2697 0.02 OrthoFinder output from all 47 species
Tin_g14620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 212 291
No external refs found!