1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_12859

Gb_12859


Description : Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana (sp|o81825|drl28_arath : 155.0)


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12859

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00252340 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00089750 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00177570 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G62630 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Ala_g21263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51065 ZAR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014155001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01014161001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017136001 No alias Probable disease resistance protein At1g61190... 0.04 OrthoFinder output from all 47 species
GSVIVT01017264001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01020292001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01034250001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_15877 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72680.1 RPS5, LOC_Os01g72680 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g14060.1 LOC_Os09g14060 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g14100.1 RPS2, LOC_Os09g14100 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g36410.1 RPS5, LOC_Os11g36410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10428204g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_10432620g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
MA_128726g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_178357g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_48202g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_502346g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8348g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g09180.1 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Mp3g09190.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g09210.1 No alias Probable disease resistance protein At4g27220... 0.05 OrthoFinder output from all 47 species
Pir_g08419 ZAR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c1_50V3.1 Pp3c1_50 disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
Pp3c3_1280V3.1 Pp3c3_1280 NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species
Pp3c3_1460V3.1 Pp3c3_1460 Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Smo111732 No alias Putative disease resistance protein At1g50180... 0.03 OrthoFinder output from all 47 species
Solyc08g005500.4.1 Solyc08g005500 Putative late blight resistance protein homolog R1A-6... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 164 349
No external refs found!