Gb_12976 (GLN1;4)

Aliases : GLN1;4

Description : Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris (sp|p52783|glna_pinsy : 392.0) & Enzyme classification.EC_6 ligases.EC_6.3 ligase forming carbon-nitrogen bond(50.6.3 : 273.1)

Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_12976
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00060p00116070	ATGSR1, GLN1;1,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.06	OrthoFinder output from all 47 species
AT5G35630	GS2, ATGSL1, GLN2	glutamine synthetase 2	0.05	OrthoFinder output from all 47 species
Aob_g04960	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g10805	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene53323.t1	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.05	OrthoFinder output from all 47 species
Cba_g08502	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.42	GLN1.3, ATGSKB6, GLN1;3	Nutrient uptake.nitrogen assimilation.ammonium...	0.03	OrthoFinder output from all 47 species
Dac_g12722	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Dcu_g02754	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Dde_g08605	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01008483001	ATGSR1, GLN1;1,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.06	OrthoFinder output from all 47 species
GSVIVT01017868001	GS2, ATGSL1, GLN2	Nutrient uptake.nitrogen assimilation.ammonium...	0.04	OrthoFinder output from all 47 species
LOC_Os04g56400.1	GS2, ATGSL1,...	plastidial glutamine synthetase (GLN2)	0.04	OrthoFinder output from all 47 species
Len_g16696	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Len_g22494	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Lfl_g12475	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
MA_9199701g0010	ATGSR1, GLN1;1,...	Glutamine synthetase cytosolic isozyme OS=Pinus...	0.07	OrthoFinder output from all 47 species
Mp1g24330.1	GLN1.3, ATGSKB6, GLN1;3	Glutamine synthetase, chloroplastic OS=Chlamydomonas...	0.07	OrthoFinder output from all 47 species
Mp5g13580.1	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.02	OrthoFinder output from all 47 species
Msp_g09593	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Msp_g12421	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Nbi_g06665	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Pir_g13405	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Pir_g59187	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Sam_g16445	No alias	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Solyc01g080280.3.1	GS2, ATGSL1,...	plastidial glutamine synthetase (GLN2)	0.05	OrthoFinder output from all 47 species
Tin_g02581	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Tin_g12121	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004356	glutamate-ammonia ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008147	Gln_synt_N	25	98

External Links

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Gb_12976 (GLN1;4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation