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  5. Gb_12981

Gb_12981


Description : (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana (sp|q9ssm2|mdll_arath : 407.0)


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12981
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00060130 EDA17, HTH,... Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT1G14185 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g48400.1 LOC_Os04g48400 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g31030.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species
MA_10041123g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10307468g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433135g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434331g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_137064g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_138671g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_15634g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_19258g0020 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_423598g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9960869g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g41402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo422534 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g121600.4.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species
Solyc06g035580.3.1 Solyc06g035580 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e002156_P001 Zm00001e002156 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004200_P002 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.04 OrthoFinder output from all 47 species
Zm00001e015434_P001 Zm00001e015434 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e033949_P001 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 380 522
IPR000172 GMC_OxRdtase_N 38 316
No external refs found!