Gb_13296


Description : p24-delta COPI trafficking regulator protein


Gene families : OG0001151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13296

Target Alias Description ECC score Gene Family Method Actions
AT1G21900 No alias emp24/gp25L/p24 family/GOLD family protein 0.03 OrthoFinder output from all 47 species
AT1G57620 No alias emp24/gp25L/p24 family/GOLD family protein 0.06 OrthoFinder output from all 47 species
AT1G69460 No alias emp24/gp25L/p24 family/GOLD family protein 0.04 OrthoFinder output from all 47 species
Als_g23512 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Aob_g00916 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Ceric.13G055000.1 Ceric.13G055000 component *(p24-delta) of GPI-anchor protein cargo... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.8 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01022966001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Pp3c9_17580V3.1 Pp3c9_17580 emp24/gp25L/p24 family/GOLD family protein 0.02 OrthoFinder output from all 47 species
Solyc01g010940.3.1 Solyc01g010940 p24-delta COPI trafficking regulator protein 0.03 OrthoFinder output from all 47 species
Solyc05g013130.3.1 Solyc05g013130 p24-delta COPI trafficking regulator protein 0.03 OrthoFinder output from all 47 species
Zm00001e015971_P002 Zm00001e015971 p24-delta COPI trafficking regulator protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 94 275
No external refs found!