1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_13910

Gb_13910 (PGP2)


Aliases : PGP2

Description : ABC transporter B family member 2 OS=Arabidopsis thaliana (sp|q8lpk2|ab2b_arath : 92.8)


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13910

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00046670 PGP2,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.03 OrthoFinder output from all 47 species
Adi_g112185 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24244 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14092 PGP21 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11005 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46501.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20621 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13758 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13909 PGP2 ABC transporter B family member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g08040 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_8519205g0010 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_93218g0010 PGP11 ABC transporter B family member 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g21430.1 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29224 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c21_18190V3.1 ABCB19,... ATP binding cassette subfamily B19 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 40 100
No external refs found!