Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 591.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_14403 | |
| Cluster | HCCA: Cluster_157 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dac_g32510 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36042 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50757 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11036 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_14728 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_23085 | No alias | RNA editing factor (MEF19) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30097 | CRR22 | RNA editing factor (CRR21) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36434 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_470025g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.09 | OrthoFinder output from all 47 species | |
| MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 247 | 274 |
| IPR002885 | Pentatricopeptide_repeat | 337 | 365 |
| IPR002885 | Pentatricopeptide_repeat | 275 | 305 |
| IPR002885 | Pentatricopeptide_repeat | 572 | 596 |
| IPR002885 | Pentatricopeptide_repeat | 307 | 335 |
| IPR002885 | Pentatricopeptide_repeat | 368 | 396 |
| IPR032867 | DYW_dom | 672 | 795 |
| IPR002885 | Pentatricopeptide_repeat | 498 | 546 |
| IPR002885 | Pentatricopeptide_repeat | 172 | 219 |
| IPR002885 | Pentatricopeptide_repeat | 397 | 444 |
| No external refs found! |
