Description : component psRPS3 of small ribosomal subunit proteome
Gene families : OG0006596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006596_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_15033 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00800 | No alias | structural constituent of ribosome | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g14422 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g09230 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05105 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G042400.1 | Ceric.05G042400 | component *(uS3c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.38G009200.1 | Ceric.38G009200 | component *(uS3c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g13090 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g16824.1 | LOC_Os04g16824 | component psRPS3 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g24416.1 | LOC_Os09g24416 | component psRPS3 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28864 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15785 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc00g500034.1.1 | Solyc00g500034 | component psRPL22 of large ribosomal subunit proteome.... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001351 | Ribosomal_S3_C | 131 | 198 |
| No external refs found! |
