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  5. Gb_16505

Gb_16505


Description : component CHL-L of light-independent protochlorophyllide oxidoreductase complex. component CHL-N of light-independent protochlorophyllide oxidoreductase complex


Gene families : OG0009108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16505
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Aev_g09366 No alias component *(CHL-N) of light-independent... 0.04 OrthoFinder output from all 47 species
Als_g16005 No alias component *(CHL-N) of light-independent... 0.07 OrthoFinder output from all 47 species
Cba_g17368 No alias component *(CHL-N) of light-independent... 0.04 OrthoFinder output from all 47 species
Ceric.05G047500.1 Ceric.05G047500 not classified & original description: pacid=50578634... 0.04 OrthoFinder output from all 47 species
Ceric.09G049400.1 Ceric.09G049400 component *(CHL-N) of light-independent... 0.16 OrthoFinder output from all 47 species
Ceric.12G083800.1 Ceric.12G083800 not classified & original description: pacid=50601076... 0.08 OrthoFinder output from all 47 species
Ceric.13G053800.1 Ceric.13G053800 component *(CHL-N) of light-independent... 0.03 OrthoFinder output from all 47 species
Ceric.18G054600.1 Ceric.18G054600 component *(CHL-N) of light-independent... 0.14 OrthoFinder output from all 47 species
Ceric.33G038200.1 Ceric.33G038200 component *(CHL-N) of light-independent... 0.05 OrthoFinder output from all 47 species
Dcu_g20880 No alias component *(CHL-N) of light-independent... 0.04 OrthoFinder output from all 47 species
Lfl_g01935 No alias component *(CHL-N) of light-independent... 0.06 OrthoFinder output from all 47 species
Mpzg00670.1 No alias Light-independent protochlorophyllide reductase subunit... 0.04 OrthoFinder output from all 47 species
Mpzg00940.1 No alias Light-independent protochlorophyllide reductase subunit... 0.04 OrthoFinder output from all 47 species
Smo137838 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000510 Nase/OxRdtase_comp1 136 552
IPR000392 NifH/frxC 2 129
No external refs found!