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  5. Gb_16779

Gb_16779


Description : no hits & (original description: none)


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16779

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00253970 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G06330 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Dde_g19756 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10273 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_352312g0010 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Msp_g26464 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018968 No alias bHLH-type transcription factor & original description: CDS=1-675 0.02 OrthoFinder output from all 47 species
Sam_g08769 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g006060.3.1 Solyc03g006060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g02444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g42112 No alias E3 ubiquiTin ligase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 51 97
No external refs found!