Gb_16838

Description : C2H2 zinc finger transcription factor

Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)

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Type	Description	Actions
Neighborhood	HRR: Gb_16838

Target	Alias	Description	ECC score	Gene Family Method
Ala_g37949	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g10313	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene27980.t2	Aspi01Gene27980	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene54445.t1	Aspi01Gene54445	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g00576	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01032538001	PMZ, SAP12	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	OrthoFinder output from all 47 species
GSVIVT01033300001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
Msp_g05298	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g10026	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Solyc02g087210.3.1	PMZ, SAP12,...	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species
Spa_g17575	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e035296_P001	Zm00001e035296	C2H2 zinc finger transcription factor	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000058	Znf_AN1	101	140
IPR000058	Znf_AN1	14	51

External Links

No external refs found!