Gb_17116

Description : component mtRPS13|psRPS13 of small ribosomal subunit proteome

Gene families : OG0010561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010561_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_17116
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
Solyc00g500226.1.1	Solyc00g500226	Uncharacterized mitochondrial protein AtMg01010...	0.02	OrthoFinder output from all 47 species
Solyc00g500262.1.1	Solyc00g500262	Uncharacterized mitochondrial protein AtMg01010...	0.03	OrthoFinder output from all 47 species
Solyc00g500351.1.1	Solyc00g500351	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.07	OrthoFinder output from all 47 species
Solyc01g017250.1.1	ORF199, Solyc01g017250	Protein TIC 214 OS=Nicotiana tomentosiformis...	0.03	OrthoFinder output from all 47 species
Solyc10g018953.1.1	Solyc10g018953	Ribosomal protein S13, mitochondrial OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Solyc11g063480.1.1	Solyc11g063480	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc11g063490.1.1	Solyc11g063490	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e022678_P001	Zm00001e022678	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001892	Ribosomal_S13	567	669

External Links

No external refs found!

Gb_17116

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation