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  5. Gb_18149

Gb_18149 (CRR2)


Aliases : CRR2

Description : OTP70 plastidial RNA splicing factor


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18149
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00175270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g31790... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00232800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
AT2G03880 REME1 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G20540 MEF21 mitochondrial editing factor 21 0.03 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G38010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
Aop_g37786 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g38061 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_03512 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_04828 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_06576 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_09792 No alias RNA editing factor (MEF7) 0.06 OrthoFinder output from all 47 species
Gb_24928 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Gb_27377 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_31111 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_32439 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_36839 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_38292 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
Len_g09780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100606g0010 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_101084g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
MA_10426261g0020 CRR22 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
MA_10429371g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.09 OrthoFinder output from all 47 species
MA_10429540g0010 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.08 OrthoFinder output from all 47 species
MA_10429837g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_10429958g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_10435641g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_107356g0010 CRR2 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 OrthoFinder output from all 47 species
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_11454g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.07 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.06 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_11517g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_116829g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_118886g0010 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_124907g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
MA_13022g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_137736g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_140591g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_16226g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.06 OrthoFinder output from all 47 species
MA_178429g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_184104g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
MA_185098g0010 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.07 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_193080g0010 CRR22 Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_20585g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_20899g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_210089g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
MA_24849g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_27147g0010 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.03 OrthoFinder output from all 47 species
MA_28607g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.09 OrthoFinder output from all 47 species
MA_30632g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_33151g0010 OTP86 Pentatricopeptide repeat-containing protein At1g18485... 0.05 OrthoFinder output from all 47 species
MA_3317g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_3449g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_3502g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
MA_35442g0010 No alias RNA editing factor (SLO2) 0.06 OrthoFinder output from all 47 species
MA_3612g0010 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
MA_36643g0010 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_442926g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_4503g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
MA_481619g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.09 OrthoFinder output from all 47 species
MA_49292g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 OrthoFinder output from all 47 species
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_55967g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_56322g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
MA_56660g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_59148g0010 CRR22 RNA editing factor (MEF11) 0.08 OrthoFinder output from all 47 species
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
MA_632994g0010 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
MA_658463g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_66417g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_68718g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_724726g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_7379g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_8491g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_858608g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_905781g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
MA_958908g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_96662g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
MA_97789g0010 CRR22 Pentatricopeptide repeat-containing protein At3g26540... 0.08 OrthoFinder output from all 47 species
Pnu_g03821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15488 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32978 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo17005 PDE247, CLB19 Pentatricopeptide repeat-containing protein At2g17210... 0.06 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
Solyc03g093630.3.1 CRR2, Solyc03g093630 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Solyc06g082880.2.1 Solyc06g082880 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
Solyc12g099620.1.1 Solyc12g099620 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Spa_g29031 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g44240 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Zm00001e012607_P002 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e014800_P001 OTP82, Zm00001e014800 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Zm00001e021380_P001 Zm00001e021380 Pentatricopeptide repeat-containing protein At3g12770... 0.07 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e036537_P001 Zm00001e036537 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 518 641
IPR002885 Pentatricopeptide_repeat 420 443
IPR002885 Pentatricopeptide_repeat 143 190
IPR002885 Pentatricopeptide_repeat 244 291
IPR002885 Pentatricopeptide_repeat 344 392
No external refs found!