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  5. Gb_18309

Gb_18309


Description : no hits & (original description: none)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18309
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00097800 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00110690 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Adi_g002011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33025 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07595 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g51907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16070.t1 Aspi01Gene16070 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g02551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.04 OrthoFinder output from all 47 species
Ceric.22G029500.1 Ceric.22G029500 not classified & original description: pacid=50614434... 0.02 OrthoFinder output from all 47 species
Ceric.22G030000.1 Ceric.22G030000 not classified & original description: pacid=50614551... 0.03 OrthoFinder output from all 47 species
Ceric.22G030100.1 BPS1, Ceric.22G030100 not classified & original description: pacid=50615453... 0.04 OrthoFinder output from all 47 species
Ceric.22G031900.1 BPS1, Ceric.22G031900 not classified & original description: pacid=50615144... 0.02 OrthoFinder output from all 47 species
Ceric.22G032000.1 Ceric.22G032000 not classified & original description: pacid=50615093... 0.02 OrthoFinder output from all 47 species
Ceric.22G032100.1 Ceric.22G032100 not classified & original description: pacid=50614987... 0.03 OrthoFinder output from all 47 species
Ceric.22G032200.1 BPS1, Ceric.22G032200 not classified & original description: pacid=50614808... 0.02 OrthoFinder output from all 47 species
Ceric.35G009900.1 Ceric.35G009900 not classified & original description: pacid=50581013... 0.04 OrthoFinder output from all 47 species
Dcu_g02755 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16221 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22435 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019411001 ROH1 No description available 0.03 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_18313 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_22842 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g01930.1 ROH1, LOC_Os02g01930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g25221 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10108167g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_103337g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10430865g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_123240g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_152437g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g08592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06670 ROH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09452 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31153 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005897 No alias not classified & original description: CDS=1-1284 0.02 OrthoFinder output from all 47 species
Smo422297 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g104660.3.1 Solyc01g104660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009073_P001 Zm00001e009073 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e041995_P001 Zm00001e041995 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 41 194
IPR008511 ROH1-like 236 374
No external refs found!