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  5. Gb_18313

Gb_18313


Description : Protein BPS1, chloroplastic OS=Arabidopsis thaliana (sp|q9lmm6|bps1_arath : 113.0)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18313
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00110690 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g024369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02419 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11016 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g15134 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18743.t1 Aspi01Gene18743 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G032100.1 Ceric.22G032100 not classified & original description: pacid=50614987... 0.06 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06780.1 LOC_Os12g06780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g14525 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g36211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 26 186
IPR008511 ROH1-like 188 357
No external refs found!