Aliases : ATCSP3, CSP3
Description : RNA chaperone (CSP). mRNA chaperone (CSD)
Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_18506 | |
| Cluster | HCCA: Cluster_122 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g22993 | ATCSP2, GRP2, CSDP2, CSP2 | cold-responsive mRNA chaperone *(CSD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02715 | ATCSP2, GRP2, CSDP2, CSP2 | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0173.g024476 | ATCSP3, CSP3 | cold-responsive mRNA chaperone *(CSD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo405045 | ATCRE1, WOL,... | External stimuli response.temperature.Csd... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| CC | GO:0005811 | lipid droplet | IEP | HCCA |
| CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| No external refs found! |
