Gb_20000

Description : protein kinase (LRR-XII)

Gene families : OG0000053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20000
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00253650	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00257080	RKL1,...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00029p00235080	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT3G47110	No alias	Leucine-rich repeat protein kinase family protein	0.04	OrthoFinder output from all 47 species
AT3G47570	No alias	Leucine-rich repeat protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT3G47580	No alias	Leucine-rich repeat protein kinase family protein	0.04	OrthoFinder output from all 47 species
AT5G20480	EFR	EF-TU receptor	0.07	OrthoFinder output from all 47 species
AT5G46330	FLS2	Leucine-rich receptor-like protein kinase family protein	0.03	OrthoFinder output from all 47 species
Ala_g03738	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dac_g39299	PXY	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
GSVIVT01007593001	SOBIR1, EVR	Leucine-rich repeat receptor-like...	0.02	OrthoFinder output from all 47 species
GSVIVT01017518001	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica	0.03	OrthoFinder output from all 47 species
GSVIVT01020735001	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica	0.04	OrthoFinder output from all 47 species
GSVIVT01021636001	No alias	Probable LRR receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
GSVIVT01021645001	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica	0.02	OrthoFinder output from all 47 species
GSVIVT01029149001	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica	0.04	OrthoFinder output from all 47 species
Gb_03527	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp....	0.05	OrthoFinder output from all 47 species
Gb_03533	No alias	protein kinase (LRR-XII)	0.05	OrthoFinder output from all 47 species
Gb_14094	No alias	protein kinase (LRR-XII)	0.05	OrthoFinder output from all 47 species
Gb_14186	No alias	protein kinase (LRR-XII)	0.04	OrthoFinder output from all 47 species
Gb_17629	EFR	LRR receptor-like serine/threonine-protein kinase EFR...	0.04	OrthoFinder output from all 47 species
Gb_17630	No alias	protein kinase (LRR-XII)	0.1	OrthoFinder output from all 47 species
Gb_22625	No alias	Putative leucine-rich repeat receptor-like...	0.05	OrthoFinder output from all 47 species
Gb_31861	No alias	protein kinase (LRR-XII)	0.04	OrthoFinder output from all 47 species
Gb_35194	RKL1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_38051	No alias	protein kinase (LRR-XII)	0.05	OrthoFinder output from all 47 species
LOC_Os01g05870.1	LOC_Os01g05870	Probable LRR receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
LOC_Os01g49910.1	LOC_Os01g49910	protein kinase (LRR-XII)	0.03	OrthoFinder output from all 47 species
LOC_Os07g03990.1	LOC_Os07g03990	protein kinase (LRR-XII)	0.04	OrthoFinder output from all 47 species
LOC_Os11g36200.1	EFR, LOC_Os11g36200	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
MA_10029851g0010	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
MA_10048917g0010	No alias	Putative leucine-rich repeat receptor-like...	0.03	OrthoFinder output from all 47 species
MA_10189275g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10322346g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10427797g0010	No alias	LRR receptor-like serine/threonine-protein kinase EFR...	0.04	OrthoFinder output from all 47 species
MA_10429142g0010	No alias	LRR receptor-like serine/threonine-protein kinase EFR...	0.04	OrthoFinder output from all 47 species
MA_10429479g0020	No alias	protein kinase (LRR-XII)	0.03	OrthoFinder output from all 47 species
MA_10431971g0010	No alias	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp....	0.07	OrthoFinder output from all 47 species
MA_10432793g0010	No alias	protein kinase (LRR-XII)	0.03	OrthoFinder output from all 47 species
MA_10433707g0010	No alias	LRR receptor-like serine/threonine-protein kinase EFR...	0.03	OrthoFinder output from all 47 species
MA_10435578g0010	No alias	protein kinase (LRR-XII)	0.04	OrthoFinder output from all 47 species
MA_10435897g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_10436092g0030	No alias	LRR receptor-like serine/threonine-protein kinase GSO1...	0.04	OrthoFinder output from all 47 species
MA_11096g0010	No alias	protein kinase (LRR-XII)	0.03	OrthoFinder output from all 47 species
MA_188166g0010	No alias	LRR receptor-like serine/threonine-protein kinase FLS2...	0.03	OrthoFinder output from all 47 species
MA_351271g0010	No alias	LRR receptor-like serine/threonine-protein kinase EFR...	0.04	OrthoFinder output from all 47 species
MA_4331773g0010	EFR	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_62344g0010	No alias	Putative leucine-rich repeat receptor-like...	0.03	OrthoFinder output from all 47 species
MA_693304g0010	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
MA_73037g0020	EFR	LRR receptor-like serine/threonine-protein kinase EFR...	0.03	OrthoFinder output from all 47 species
MA_8134842g0020	No alias	protein kinase (LRR-XII)	0.03	OrthoFinder output from all 47 species
MA_87248g0010	No alias	protein kinase (LRR-XII)	0.03	OrthoFinder output from all 47 species
Smo413321	No alias	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
Solyc02g031790.3.1	Solyc02g031790	protein kinase (LRR-XII)	0.02	OrthoFinder output from all 47 species
Solyc06g006028.1.1	BAM1, Solyc06g006028	LRR receptor-like serine/threonine-protein kinase EFR...	0.03	OrthoFinder output from all 47 species
Solyc06g048735.1.1	BAM1, Solyc06g048735	LRR receptor-like serine/threonine-protein kinase FLS2...	0.03	OrthoFinder output from all 47 species
Solyc07g016000.1.1	Solyc07g016000	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
Zm00001e036300_P001	Zm00001e036300	protein kinase (LRR-XII)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013210	LRR_N_plant-typ	25	64
IPR000719	Prot_kinase_dom	598	879
IPR001611	Leu-rich_rpt	264	324
IPR001611	Leu-rich_rpt	402	462

External Links

No external refs found!

Gb_20000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation