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  5. Gb_20020

Gb_20020 (RSZ21, At-RSZ21,...)


Aliases : RSZ21, At-RSZ21, SRZ-21, SRZ21, RSZP21

Description : RSZ21/22 RNA splicing factor


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20020

Target Alias Description ECC score Gene Family Method Actions
Adi_g019585 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G091500.1 At-RSZ22a,... RNA splicing factor *(RSZ21/22) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G052000.1 At-RSZ22a,... RNA splicing factor *(RSZ21/22) & original description:... 0.09 OrthoFinder output from all 47 species
Cre09.g408200 At-RSZ22a, RSZ22a RNA processing.RNA splicing.spliceosome-associated... 0.05 OrthoFinder output from all 47 species
Dac_g32477 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15858 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16463 At-RSZ22a, RSZ22a RSZ21/22 RNA splicing factor 0.05 OrthoFinder output from all 47 species
Gb_21375 At-RSZ22a, RSZ22a RSZ21/22 RNA splicing factor 0.03 OrthoFinder output from all 47 species
MA_10435943g0010 At-RSZ22a, RSZ22a RSZ21/22 RNA splicing factor 0.03 OrthoFinder output from all 47 species
Ore_g19642 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18145 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g66414 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g44647 No alias RNA splicing factor *(RSZ21/22) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g01672 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11590 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50090 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 140 155
IPR000504 RRM_dom 79 111
No external refs found!