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  5. Gb_20254

Gb_20254


Description : Non-specific lipid-transfer protein OS=Gerbera hybrida (sp|q39794|nltp_gerhy : 89.0)


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20254
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00101310 evm_27.TU.AmTr_v1... Putative non-specific lipid-transfer protein 14... 0.04 OrthoFinder output from all 47 species
AMTR_s00162p00022020 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G51590 LTP12 lipid transfer protein 12 0.07 OrthoFinder output from all 47 species
AT4G28395 ATA7, A7 Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT4G28397 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 OrthoFinder output from all 47 species
AT4G33355 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT5G01870 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT5G44265 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Aspi01Gene28784.t1 LTP4, Aspi01Gene28784 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36893.t1 Aspi01Gene36893 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36901.t1 Aspi01Gene36901 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012608 No alias not classified & original description: CDS=9-443 0.03 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.05 OrthoFinder output from all 47 species
Ceric.02G006500.1 Ceric.02G006500 not classified & original description: pacid=50583964... 0.04 OrthoFinder output from all 47 species
Dcu_g37886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29058 LTP1, ATLTP1, LP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006001001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01024563001 LTP5 Non-specific lipid-transfer protein 1 OS=Morus nigra 0.03 OrthoFinder output from all 47 species
Gb_00826 No alias Non-specific lipid-transfer protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_19511 LTP1, ATLTP1, LP1 Non-specific lipid-transfer protein 5 OS=Lens culinaris... 0.03 OrthoFinder output from all 47 species
Gb_25561 LTP3 Non-specific lipid-transfer protein 4 (Fragment) OS=Lens... 0.04 OrthoFinder output from all 47 species
LOC_Os01g12020.1 LOC_Os01g12020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06340.1 LOC_Os06g06340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g59234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_110959g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_128304g0010 No alias Non-specific lipid-transfer protein 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_164786g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18806g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_209545g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.05 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_5482715g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_58978g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.02 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8724326g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_903132g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Ore_g22339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06659 LTP6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019322 No alias not classified & original description: CDS=195-662 0.04 OrthoFinder output from all 47 species
Sam_g02853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g090360.3.1 Solyc01g090360 Non-specific lipid-transfer protein 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g026090.4.1 Solyc03g026090 Putative non-specific lipid-transfer protein 14... 0.07 OrthoFinder output from all 47 species
Solyc06g005795.2.1 Solyc06g005795 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g067500.1.1 Solyc08g067500 no description available(sp|a0a2j6kl39|nltp_lacsa : 85.1) 0.02 OrthoFinder output from all 47 species
Solyc08g067510.1.1 LTP3, Solyc08g067510 no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.04 OrthoFinder output from all 47 species
Solyc08g067550.1.1 Solyc08g067550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g008500.3.1 Solyc09g008500 Non-specific lipid-transfer protein 2 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc09g150148.1.1 Solyc09g150148 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g012110.3.1 Solyc10g012110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g012120.1.1 Solyc10g012120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g012130.1.1 Solyc10g012130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g075070.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075100.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075107.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075150.2.1 Solyc10g075150 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc10g076200.3.1 Solyc10g076200 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Tin_g40525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019437_P001 Zm00001e019437 Non-specific lipid-transfer protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037122_P001 Zm00001e037122 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 44 121
No external refs found!