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  5. Gb_20328

Gb_20328


Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20328
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00239880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00142420 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G25930 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g66074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28485.t1 Aspi01Gene28485 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29654.t1 Aspi01Gene29654 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene37518.t1 Aspi01Gene37518 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene37518.t2 Aspi01Gene37518 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55688.t1 Aspi01Gene55688 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62788.t1 Aspi01Gene62788 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025221 No alias not classified & original description: CDS=693-1163 0.03 OrthoFinder output from all 47 species
Ceric.06G009300.1 Ceric.06G009300 not classified & original description: pacid=50619371... 0.03 OrthoFinder output from all 47 species
Ceric.14G013200.1 Ceric.14G013200 not classified & original description: pacid=50633294... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000836.17 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g29720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23687 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000443001 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028109001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_33366 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g19820.3 LOC_Os01g19820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g06554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g50840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g20886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26567 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100052g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10063081g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10437265g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10838g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_11149g0010 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_114091g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_139433g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_57598g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g21502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11852 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g64165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100370.3.1 Solyc01g100370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g109710.3.1 RD2, Solyc01g109710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005689_P006 Zm00001e005689 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027691_P001 Zm00001e027691 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035202_P002 Zm00001e035202 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039685_P001 Zm00001e039685 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040676_P001 Zm00001e040676 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 8 157
No external refs found!