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  5. Gb_20468

Gb_20468


Description : subfamily ABCG transporter


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20468
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.08 OrthoFinder output from all 47 species
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.06 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AT1G53270 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT2G13610 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT2G37360 No alias ABC-2 type transporter family protein 0.09 OrthoFinder output from all 47 species
AT3G53510 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.08 OrthoFinder output from all 47 species
AT3G55130 WBC19, ATWBC19 white-brown complex homolog 19 0.02 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.09 OrthoFinder output from all 47 species
Aob_g32906 WBC19, ATWBC19 ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07578.t1 Aspi01Gene07578 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000270.12 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01025582001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.1 OrthoFinder output from all 47 species
Gb_24085 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g61940.1 LOC_Os01g61940 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
LOC_Os05g02890.1 LOC_Os05g02890 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26422 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
MA_10426701g0030 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10432886g0010 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g04860.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g15770.1 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11905 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718 No alias not classified & original description: CDS=1-2514 0.03 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.11 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc05g054890.4.1 Solyc05g054890 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc09g005970.1.1 Solyc09g005970 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37465 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 487 695
IPR003439 ABC_transporter-like_ATP-bd 157 309
No external refs found!