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  5. Gb_20684

Gb_20684


Description : C85 Otubain cysteine protease


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20684

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00082170 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aop_g16488 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g541100 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g01353 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016238001 No alias No description available 0.04 OrthoFinder output from all 47 species
Sam_g36823 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g008020.4.1 Solyc09g008020 C85 Otubain cysteine protease 0.04 OrthoFinder output from all 47 species
Zm00001e011614_P001 Zm00001e011614 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 208 296
No external refs found!