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  5. Gb_22123

Gb_22123


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 211.0)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22123
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g004844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024544 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g038928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g119668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g123800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28677 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34121 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g48539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g50255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00563.t1 Aspi01Gene00563 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00565.t1 Aspi01Gene00565 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08224.t1 Aspi01Gene08224 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08504.t1 Aspi01Gene08504 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09204.t1 Aspi01Gene09204 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10996.t1 CRK8, Aspi01Gene10996 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12944.t1 Aspi01Gene12944 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18208.t1 CRK8, Aspi01Gene18208 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18322.t1 Aspi01Gene18322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19274.t1 Aspi01Gene19274 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25393.t1 Aspi01Gene25393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27663.t1 ORF240B, Aspi01Gene27663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29223.t1 Aspi01Gene29223 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31236.t1 Aspi01Gene31236 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31527.t1 Aspi01Gene31527 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33142.t1 Aspi01Gene33142 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39268.t1 Aspi01Gene39268 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene41179.t1 CRK8, Aspi01Gene41179 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46956.t1 Aspi01Gene46956 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50985.t1 Aspi01Gene50985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52980.t1 Aspi01Gene52980 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59929.t1 CRK8, Aspi01Gene59929 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63834.t1 ORF240B, Aspi01Gene63834 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67592.t2 CRK8, Aspi01Gene67592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G073400.1 Ceric.03G073400 not classified & original description: pacid=50573040... 0.03 OrthoFinder output from all 47 species
Ceric.04G034100.1 Ceric.04G034100 not classified & original description: pacid=50631391... 0.03 OrthoFinder output from all 47 species
Ceric.04G043300.1 Ceric.04G043300 not classified & original description: pacid=50631857... 0.03 OrthoFinder output from all 47 species
Ceric.05G069300.1 Ceric.05G069300 not classified & original description: pacid=50577362... 0.03 OrthoFinder output from all 47 species
Ceric.07G036400.1 Ceric.07G036400 not classified & original description: pacid=50626002... 0.03 OrthoFinder output from all 47 species
Ceric.09G063700.1 Ceric.09G063700 not classified & original description: pacid=50588392... 0.03 OrthoFinder output from all 47 species
Ceric.10G075800.1 Ceric.10G075800 not classified & original description: pacid=50612155... 0.03 OrthoFinder output from all 47 species
Ceric.12G025000.1 Ceric.12G025000 not classified & original description: pacid=50601304... 0.03 OrthoFinder output from all 47 species
Ceric.13G016000.1 Ceric.13G016000 not classified & original description: pacid=50636669... 0.03 OrthoFinder output from all 47 species
Ceric.13G049800.1 Ceric.13G049800 not classified & original description: pacid=50636391... 0.03 OrthoFinder output from all 47 species
Ceric.16G048700.1 Ceric.16G048700 not classified & original description: pacid=50589460... 0.03 OrthoFinder output from all 47 species
Ceric.18G001200.1 CRK8, Ceric.18G001200 not classified & original description: pacid=50621792... 0.03 OrthoFinder output from all 47 species
Ceric.18G013600.1 Ceric.18G013600 not classified & original description: pacid=50622178... 0.03 OrthoFinder output from all 47 species
Ceric.21G079700.1 Ceric.21G079700 not classified & original description: pacid=50603141... 0.02 OrthoFinder output from all 47 species
Ceric.22G076900.1 Ceric.22G076900 not classified & original description: pacid=50614764... 0.03 OrthoFinder output from all 47 species
Ceric.23G035000.1 Ceric.23G035000 not classified & original description: pacid=50610725... 0.03 OrthoFinder output from all 47 species
Ceric.24G080000.1 Ceric.24G080000 not classified & original description: pacid=50628615... 0.03 OrthoFinder output from all 47 species
Ceric.28G058400.1 Ceric.28G058400 not classified & original description: pacid=50571006... 0.03 OrthoFinder output from all 47 species
Ceric.35G004700.1 CRK8, Ceric.35G004700 not classified & original description: pacid=50581602... 0.03 OrthoFinder output from all 47 species
Ceric.35G009500.1 CRK8, Ceric.35G009500 not classified & original description: pacid=50581405... 0.03 OrthoFinder output from all 47 species
Dcu_g06633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18937 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18938 ORF111A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27517 No alias Bowman-Birk protease inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32238 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_23260 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_24037 CRK8 Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species
Gb_28128 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_30803 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_33898 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_40913 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Len_g12961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24710 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26953 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16735 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22637 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35118 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35296 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07087 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04356 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22481 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_14360V3.1 Pp3c13_14360 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c14_6702V3.1 Pp3c14_6702 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c20_550V3.1 Pp3c20_550 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Ppi_g45032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g030553.1.1 Solyc11g030553 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Spa_g26206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 1 74
No external refs found!