1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_22438

Gb_22438


Description : Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica (sp|q0jaa0|p2c44_orysj : 135.0)


Gene families : OG0000578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22438
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT2G34740 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
AT3G15260 No alias Protein phosphatase 2C family protein 0.01 OrthoFinder output from all 47 species
Adi_g061254 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37504 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70124 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00912.t1 Aspi01Gene00912 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10471.t1 Aspi01Gene10471 clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030811 No alias clade F phosphatase & original description: CDS=230-1078 0.04 OrthoFinder output from all 47 species
Azfi_s0358.g066805 PAPP2C clade F phosphatase & original description: CDS=300-1163 0.04 OrthoFinder output from all 47 species
Dac_g13905 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15058 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g08617 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_174291g0010 No alias clade F phosphatase 0.03 OrthoFinder output from all 47 species
Mp5g14150.1 No alias clade F phosphatase 0.02 OrthoFinder output from all 47 species
Sam_g10240 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g087460.3.1 Solyc01g087460 clade F phosphatase 0.03 OrthoFinder output from all 47 species
Tin_g06460 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010471_P001 Zm00001e010471 clade F phosphatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 99 201
IPR001932 PPM-type_phosphatase-like_dom 222 281
No external refs found!