Aliases : OTP84
Description : RNA editing factor (OTP82)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00233950 | No alias | Pentatricopeptide repeat-containing protein At4g37170... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00038p00071780 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g023764 | LPA66 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g069188 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g70449 | DOT4 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G008800.1 | Ceric.20G008800 | not classified & original description: pacid=50566037... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000383.101 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g05615 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38525 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031849001 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| MA_119635g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_179801g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_392600g0010 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.07 | OrthoFinder output from all 47 species | |
| MA_6511g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_733561g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| MA_73895g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
| MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g03763 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0046.g013331 | No alias | not classified & original description: CDS=1-2106 | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g005280.1.1 | Solyc02g005280 | Pentatricopeptide repeat-containing protein At1g50270... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g007840.1.1 | Solyc03g007840 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g116000.1.1 | Solyc03g116000 | Pentatricopeptide repeat-containing protein At3g47530... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g023900.1.1 | Solyc05g023900 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g006575.1.1 | OTP82, Solyc12g006575 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g35636 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011519_P001 | Zm00001e011519 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 796 | 920 |
| IPR002885 | Pentatricopeptide_repeat | 226 | 254 |
| IPR002885 | Pentatricopeptide_repeat | 331 | 359 |
| IPR002885 | Pentatricopeptide_repeat | 361 | 390 |
| IPR002885 | Pentatricopeptide_repeat | 766 | 792 |
| IPR002885 | Pentatricopeptide_repeat | 697 | 724 |
| IPR002885 | Pentatricopeptide_repeat | 258 | 305 |
| IPR002885 | Pentatricopeptide_repeat | 129 | 175 |
| IPR002885 | Pentatricopeptide_repeat | 522 | 569 |
| IPR002885 | Pentatricopeptide_repeat | 623 | 671 |
| IPR002885 | Pentatricopeptide_repeat | 421 | 468 |
| No external refs found! |
