1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_23397

Gb_23397 (ATOMT1, OMT1)


Aliases : ATOMT1, OMT1

Description : Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 104.1) & Flavone 3-O-methyltransferase 1 OS=Arabidopsis thaliana (sp|q9fk25|omt1_arath : 86.7)


Gene families : OG0000070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23397
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253410 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.06 OrthoFinder output from all 47 species
AMTR_s00003p00249110 ATOMT1, OMT1,... Enzyme classification.EC_2 transferases.EC_2.1... 0.05 OrthoFinder output from all 47 species
AT1G21120 No alias O-methyltransferase family protein 0.04 OrthoFinder output from all 47 species
AT1G21130 No alias O-methyltransferase family protein 0.02 OrthoFinder output from all 47 species
AT1G77530 No alias O-methyltransferase family protein 0.03 OrthoFinder output from all 47 species
AT5G54160 ATOMT1, OMT1 O-methyltransferase 1 0.03 OrthoFinder output from all 47 species
Adi_g043426 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g30350 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g49251 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33352.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.54 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01020640001 No alias Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01027448001 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
GSVIVT01027449001 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
GSVIVT01027453001 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
GSVIVT01038653001 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
Gb_35314 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.06 OrthoFinder output from all 47 species
LOC_Os04g09670.1 LOC_Os04g09670 Caffeate O-methyltransferase-like protein 2 OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43930.1 LOC_Os05g43930 O-methyltransferase ZRP4 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33300.1 LOC_Os11g33300 Acetylserotonin O-methyltransferase 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_10270590g0010 No alias Anthranilate N-methyltransferase OS=Ruta graveolens... 0.03 OrthoFinder output from all 47 species
MA_10375504g0010 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
MA_48017g0010 No alias Caffeic acid 3-O-methyltransferase 3 OS=Populus... 0.03 OrthoFinder output from all 47 species
MA_5637g0010 No alias Xanthohumol 4-O-methyltransferase OS=Humulus lupulus... 0.03 OrthoFinder output from all 47 species
Ore_g26095 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ore_g32236 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pir_g35322 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Solyc06g064500.3.1 ATOMT1, OMT1,... Trans-resveratrol di-O-methyltransferase OS=Vitis... 0.03 OrthoFinder output from all 47 species
Solyc06g083450.4.1 Solyc06g083450 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Zm00001e004040_P001 Zm00001e004040 Acetylserotonin O-methyltransferase 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e020964_P001 Zm00001e020964 Probable O-methyltransferase 2 OS=Sorghum bicolor... 0.02 OrthoFinder output from all 47 species
Zm00001e023555_P001 Zm00001e023555 nicotinate N-methyltransferase 0.03 OrthoFinder output from all 47 species
Zm00001e037965_P002 Zm00001e037965 5-pentadecatrienyl resorcinol O-methyltransferase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_dom 64 145
No external refs found!